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Please cite:

If this software is useful to you, we'd appreciate it if you cited our paper.

Clack NG, O'Connor DH, Huber D, Petreanu L, Hires A., Peron, S., Svoboda, K., and Myers, E.W. (2012) 
Automated Tracking of Whiskers in Videos of Head Fixed Rodents.
PLoS Comput Biol 8(7):e1002591. doi:10.1371/journal.pcbi.1002591
?Read it here.

Latest (v1.1.0)

Changes from v1.0.2 to v1.1.0
Changes from v1.0.0 to v1.0.2

Full package

Note: The new GUI has not be extensively tested.  Please report any problems you have.

File

CPU

Build

Description

whisk-1.1.0d-win32.exe

x86

Debug

Binary installer for Windows XP and greater

whisk-1.1.0d-win64.exe

x64

Debug

Binary installer for Windows XP and greater

whisk-1.1.0d-Darwin.tar.gz

x86 x64

Release

Package of universal binaries for Max OSX 10.5+

whisk-1.1.0d-32bit-Linux.tar.gz

x86

Release

Binary package ELF 32-bit LSB, for GNU/Linux 2.6.15

whisk-1.1.0d-64bit-Linux.tar.gz

x64

Release

Binary package ELF 64-bit LSB, for GNU/Linux 2.6.15

Matlab commands only

Note: These only save and load the data files produced during tracing and tracking. They are also provided by the full package (above).

File

CPU

Build

Description

whisk-1.1.0d-win-matlab32.zip

x86

Release

Functions for 32-bit Matlab on Windows.

whisk-1.1.0d-win-matlab64.zip

x64

Release

Functions for 64-bit Matlab on Windows.

whisk-1.1.0d-Darwin-matlab.zip

x86 x64

Release

Functions for Matlab on Max OSX 10.5+

Sample Data

File

Description

movie.mp4

Example video used in the tutorial.

movie.whiskers

Traced curves from the example video.

movie.measurements

Tracking data for the traced curves in the example video.

Past versions

v1.0.2

File

CPU

Build

Description

whisk-1.0.2-win32.exe

x86

Debug

Binary installer for Windows XP and greater

whisk-1.0.2-win64.exe

x64

Debug

Binary installer for Windows XP and greater

whisk-1.0.2-Darwin.tar.gz

x86 x64

Release

Package of universal binaries for Max OSX 10.5+

whisk-1.0.2-32bit-Linux.tar.gz

x86

Release

Binary package ELF 32-bit LSB, for GNU/Linux 2.6.15

whisk-1.0.2-64bit-Linux.tar.gz

x64

Release
TIFF/SEQ videos only

Binary package ELF 64-bit LSB, for GNU/Linux 2.6.15 (No FFMPEG)

v1.0.0

File

CPU

Build

Description

whisk-1.0.0-win32.exe

x86

Release

Binary installer for Windows XP and greater

whisk-1.0.0-Darwin.tar.gz

x86 x64 ppc

Release

Package of universal binaries for Max OSX 10.5+

whisk-1.0.0-Linux.tar.gz

x86

Release

Binary package ELF 32-bit LSB, for GNU/Linux 2.6.15

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